vis.js is a dynamic, browser-based visualization library
You can not select more than 25 topics Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
 
 
 

446 lines
13 KiB

/**
* Created by Alex on 2/23/2015.
*/
class BarnesHutSolver {
constructor(body, physicsBody, options) {
this.body = body;
this.physicsBody = physicsBody;
this.barnesHutTree;
this.setOptions(options);
}
setOptions(options) {
this.options = options;
}
/**
* This function calculates the forces the nodes apply on eachother based on a gravitational model.
* The Barnes Hut method is used to speed up this N-body simulation.
*
* @private
*/
solve() {
if (this.options.gravitationalConstant != 0) {
var node;
var nodes = this.body.nodes;
var nodeIndices = this.physicsBody.physicsNodeIndices;
var nodeCount = nodeIndices.length;
// create the tree
var barnesHutTree = this._formBarnesHutTree(nodes, nodeIndices);
// for debugging
this.barnesHutTree = barnesHutTree;
// place the nodes one by one recursively
for (var i = 0; i < nodeCount; i++) {
node = nodes[nodeIndices[i]];
if (node.options.mass > 0) {
// starting with root is irrelevant, it never passes the BarnesHutSolver condition
this._getForceContribution(barnesHutTree.root.children.NW, node);
this._getForceContribution(barnesHutTree.root.children.NE, node);
this._getForceContribution(barnesHutTree.root.children.SW, node);
this._getForceContribution(barnesHutTree.root.children.SE, node);
}
}
}
}
/**
* This function traverses the barnesHutTree. It checks when it can approximate distant nodes with their center of mass.
* If a region contains a single node, we check if it is not itself, then we apply the force.
*
* @param parentBranch
* @param node
* @private
*/
_getForceContribution(parentBranch, node) {
// we get no force contribution from an empty region
if (parentBranch.childrenCount > 0) {
var dx, dy, distance;
// get the distance from the center of mass to the node.
dx = parentBranch.centerOfMass.x - node.x;
dy = parentBranch.centerOfMass.y - node.y;
distance = Math.sqrt(dx * dx + dy * dy);
// BarnesHutSolver condition
// original condition : s/d < thetaInverted = passed === d/s > 1/theta = passed
// calcSize = 1/s --> d * 1/s > 1/theta = passed
if (distance * parentBranch.calcSize > this.options.thetaInverted) {
// duplicate code to reduce function calls to speed up program
if (distance == 0) {
distance = 0.1 * Math.random();
dx = distance;
}
var gravityForce = this.options.gravitationalConstant * parentBranch.mass * node.options.mass / (distance * distance * distance);
var fx = dx * gravityForce;
var fy = dy * gravityForce;
this.physicsBody.forces[node.id].x += fx;
this.physicsBody.forces[node.id].y += fy;
}
else {
// Did not pass the condition, go into children if available
if (parentBranch.childrenCount == 4) {
this._getForceContribution(parentBranch.children.NW, node);
this._getForceContribution(parentBranch.children.NE, node);
this._getForceContribution(parentBranch.children.SW, node);
this._getForceContribution(parentBranch.children.SE, node);
}
else { // parentBranch must have only one node, if it was empty we wouldnt be here
if (parentBranch.children.data.id != node.id) { // if it is not self
// duplicate code to reduce function calls to speed up program
if (distance == 0) {
distance = 0.5 * Math.random();
dx = distance;
}
var gravityForce = this.options.gravitationalConstant * parentBranch.mass * node.options.mass / (distance * distance * distance);
var fx = dx * gravityForce;
var fy = dy * gravityForce;
this.physicsBody.forces[node.id].x += fx;
this.physicsBody.forces[node.id].y += fy;
}
}
}
}
}
/**
* This function constructs the barnesHut tree recursively. It creates the root, splits it and starts placing the nodes.
*
* @param nodes
* @param nodeIndices
* @private
*/
_formBarnesHutTree(nodes, nodeIndices) {
var node;
var nodeCount = nodeIndices.length;
var minX = Number.MAX_VALUE,
minY = Number.MAX_VALUE,
maxX = -Number.MAX_VALUE,
maxY = -Number.MAX_VALUE;
// get the range of the nodes
for (var i = 0; i < nodeCount; i++) {
var x = nodes[nodeIndices[i]].x;
var y = nodes[nodeIndices[i]].y;
if (nodes[nodeIndices[i]].options.mass > 0) {
if (x < minX) {
minX = x;
}
if (x > maxX) {
maxX = x;
}
if (y < minY) {
minY = y;
}
if (y > maxY) {
maxY = y;
}
}
}
// make the range a square
var sizeDiff = Math.abs(maxX - minX) - Math.abs(maxY - minY); // difference between X and Y
if (sizeDiff > 0) {
minY -= 0.5 * sizeDiff;
maxY += 0.5 * sizeDiff;
} // xSize > ySize
else {
minX += 0.5 * sizeDiff;
maxX -= 0.5 * sizeDiff;
} // xSize < ySize
var minimumTreeSize = 1e-5;
var rootSize = Math.max(minimumTreeSize, Math.abs(maxX - minX));
var halfRootSize = 0.5 * rootSize;
var centerX = 0.5 * (minX + maxX), centerY = 0.5 * (minY + maxY);
// construct the barnesHutTree
var barnesHutTree = {
root: {
centerOfMass: {x: 0, y: 0},
mass: 0,
range: {
minX: centerX - halfRootSize, maxX: centerX + halfRootSize,
minY: centerY - halfRootSize, maxY: centerY + halfRootSize
},
size: rootSize,
calcSize: 1 / rootSize,
children: {data: null},
maxWidth: 0,
level: 0,
childrenCount: 4
}
};
this._splitBranch(barnesHutTree.root);
// place the nodes one by one recursively
for (i = 0; i < nodeCount; i++) {
node = nodes[nodeIndices[i]];
if (node.options.mass > 0) {
this._placeInTree(barnesHutTree.root, node);
}
}
// make global
return barnesHutTree
}
/**
* this updates the mass of a branch. this is increased by adding a node.
*
* @param parentBranch
* @param node
* @private
*/
_updateBranchMass(parentBranch, node) {
var totalMass = parentBranch.mass + node.options.mass;
var totalMassInv = 1 / totalMass;
parentBranch.centerOfMass.x = parentBranch.centerOfMass.x * parentBranch.mass + node.x * node.options.mass;
parentBranch.centerOfMass.x *= totalMassInv;
parentBranch.centerOfMass.y = parentBranch.centerOfMass.y * parentBranch.mass + node.y * node.options.mass;
parentBranch.centerOfMass.y *= totalMassInv;
parentBranch.mass = totalMass;
var biggestSize = Math.max(Math.max(node.height, node.radius), node.width);
parentBranch.maxWidth = (parentBranch.maxWidth < biggestSize) ? biggestSize : parentBranch.maxWidth;
}
/**
* determine in which branch the node will be placed.
*
* @param parentBranch
* @param node
* @param skipMassUpdate
* @private
*/
_placeInTree(parentBranch, node, skipMassUpdate) {
if (skipMassUpdate != true || skipMassUpdate === undefined) {
// update the mass of the branch.
this._updateBranchMass(parentBranch, node);
}
if (parentBranch.children.NW.range.maxX > node.x) { // in NW or SW
if (parentBranch.children.NW.range.maxY > node.y) { // in NW
this._placeInRegion(parentBranch, node, "NW");
}
else { // in SW
this._placeInRegion(parentBranch, node, "SW");
}
}
else { // in NE or SE
if (parentBranch.children.NW.range.maxY > node.y) { // in NE
this._placeInRegion(parentBranch, node, "NE");
}
else { // in SE
this._placeInRegion(parentBranch, node, "SE");
}
}
}
/**
* actually place the node in a region (or branch)
*
* @param parentBranch
* @param node
* @param region
* @private
*/
_placeInRegion(parentBranch, node, region) {
switch (parentBranch.children[region].childrenCount) {
case 0: // place node here
parentBranch.children[region].children.data = node;
parentBranch.children[region].childrenCount = 1;
this._updateBranchMass(parentBranch.children[region], node);
break;
case 1: // convert into children
// if there are two nodes exactly overlapping (on init, on opening of cluster etc.)
// we move one node a pixel and we do not put it in the tree.
if (parentBranch.children[region].children.data.x == node.x &&
parentBranch.children[region].children.data.y == node.y) {
node.x += Math.random();
node.y += Math.random();
}
else {
this._splitBranch(parentBranch.children[region]);
this._placeInTree(parentBranch.children[region], node);
}
break;
case 4: // place in branch
this._placeInTree(parentBranch.children[region], node);
break;
}
}
/**
* this function splits a branch into 4 sub branches. If the branch contained a node, we place it in the subbranch
* after the split is complete.
*
* @param parentBranch
* @private
*/
_splitBranch(parentBranch) {
// if the branch is shaded with a node, replace the node in the new subset.
var containedNode = null;
if (parentBranch.childrenCount == 1) {
containedNode = parentBranch.children.data;
parentBranch.mass = 0;
parentBranch.centerOfMass.x = 0;
parentBranch.centerOfMass.y = 0;
}
parentBranch.childrenCount = 4;
parentBranch.children.data = null;
this._insertRegion(parentBranch, "NW");
this._insertRegion(parentBranch, "NE");
this._insertRegion(parentBranch, "SW");
this._insertRegion(parentBranch, "SE");
if (containedNode != null) {
this._placeInTree(parentBranch, containedNode);
}
}
/**
* This function subdivides the region into four new segments.
* Specifically, this inserts a single new segment.
* It fills the children section of the parentBranch
*
* @param parentBranch
* @param region
* @param parentRange
* @private
*/
_insertRegion(parentBranch, region) {
var minX, maxX, minY, maxY;
var childSize = 0.5 * parentBranch.size;
switch (region) {
case "NW":
minX = parentBranch.range.minX;
maxX = parentBranch.range.minX + childSize;
minY = parentBranch.range.minY;
maxY = parentBranch.range.minY + childSize;
break;
case "NE":
minX = parentBranch.range.minX + childSize;
maxX = parentBranch.range.maxX;
minY = parentBranch.range.minY;
maxY = parentBranch.range.minY + childSize;
break;
case "SW":
minX = parentBranch.range.minX;
maxX = parentBranch.range.minX + childSize;
minY = parentBranch.range.minY + childSize;
maxY = parentBranch.range.maxY;
break;
case "SE":
minX = parentBranch.range.minX + childSize;
maxX = parentBranch.range.maxX;
minY = parentBranch.range.minY + childSize;
maxY = parentBranch.range.maxY;
break;
}
parentBranch.children[region] = {
centerOfMass: {x: 0, y: 0},
mass: 0,
range: {minX: minX, maxX: maxX, minY: minY, maxY: maxY},
size: 0.5 * parentBranch.size,
calcSize: 2 * parentBranch.calcSize,
children: {data: null},
maxWidth: 0,
level: parentBranch.level + 1,
childrenCount: 0
};
}
//--------------------------- DEBUGGING BELOW ---------------------------//
/**
* This function is for debugging purposed, it draws the tree.
*
* @param ctx
* @param color
* @private
*/
_debug(ctx, color) {
if (this.barnesHutTree !== undefined) {
ctx.lineWidth = 1;
this._drawBranch(this.barnesHutTree.root, ctx, color);
}
}
/**
* This function is for debugging purposes. It draws the branches recursively.
*
* @param branch
* @param ctx
* @param color
* @private
*/
_drawBranch(branch, ctx, color) {
if (color === undefined) {
color = "#FF0000";
}
if (branch.childrenCount == 4) {
this._drawBranch(branch.children.NW, ctx);
this._drawBranch(branch.children.NE, ctx);
this._drawBranch(branch.children.SE, ctx);
this._drawBranch(branch.children.SW, ctx);
}
ctx.strokeStyle = color;
ctx.beginPath();
ctx.moveTo(branch.range.minX, branch.range.minY);
ctx.lineTo(branch.range.maxX, branch.range.minY);
ctx.stroke();
ctx.beginPath();
ctx.moveTo(branch.range.maxX, branch.range.minY);
ctx.lineTo(branch.range.maxX, branch.range.maxY);
ctx.stroke();
ctx.beginPath();
ctx.moveTo(branch.range.maxX, branch.range.maxY);
ctx.lineTo(branch.range.minX, branch.range.maxY);
ctx.stroke();
ctx.beginPath();
ctx.moveTo(branch.range.minX, branch.range.maxY);
ctx.lineTo(branch.range.minX, branch.range.minY);
ctx.stroke();
/*
if (branch.mass > 0) {
ctx.circle(branch.centerOfMass.x, branch.centerOfMass.y, 3*branch.mass);
ctx.stroke();
}
*/
}
}
export {BarnesHutSolver};