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1309 lines
46 KiB
1309 lines
46 KiB
'use strict';
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let util = require('../../util');
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import NetworkUtil from '../NetworkUtil';
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class LayoutEngine {
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constructor(body) {
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this.body = body;
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this.initialRandomSeed = Math.round(Math.random() * 1000000);
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this.randomSeed = this.initialRandomSeed;
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this.setPhysics = false;
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this.options = {};
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this.optionsBackup = {physics:{}};
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this.defaultOptions = {
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randomSeed: undefined,
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improvedLayout: true,
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hierarchical: {
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enabled:false,
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levelSeparation: 150,
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nodeSpacing: 100,
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treeSpacing: 200,
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blockShifting: true,
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edgeMinimization: true,
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direction: 'UD', // UD, DU, LR, RL
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sortMethod: 'hubsize' // hubsize, directed
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}
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};
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util.extend(this.options, this.defaultOptions);
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this.bindEventListeners();
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}
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bindEventListeners() {
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this.body.emitter.on('_dataChanged', () => {
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this.setupHierarchicalLayout();
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});
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this.body.emitter.on('_dataLoaded', () => {
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this.layoutNetwork();
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});
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this.body.emitter.on('_resetHierarchicalLayout', () => {
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this.setupHierarchicalLayout();
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});
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}
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setOptions(options, allOptions) {
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if (options !== undefined) {
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let prevHierarchicalState = this.options.hierarchical.enabled;
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util.selectiveDeepExtend(["randomSeed", "improvedLayout"],this.options, options);
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util.mergeOptions(this.options, options, 'hierarchical');
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if (options.randomSeed !== undefined) {this.initialRandomSeed = options.randomSeed;}
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if (this.options.hierarchical.enabled === true) {
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if (prevHierarchicalState === true) {
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// refresh the overridden options for nodes and edges.
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this.body.emitter.emit('refresh', true);
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}
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// make sure the level separation is the right way up
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if (this.options.hierarchical.direction === 'RL' || this.options.hierarchical.direction === 'DU') {
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if (this.options.hierarchical.levelSeparation > 0) {
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this.options.hierarchical.levelSeparation *= -1;
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}
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}
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else {
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if (this.options.hierarchical.levelSeparation < 0) {
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this.options.hierarchical.levelSeparation *= -1;
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}
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}
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this.body.emitter.emit('_resetHierarchicalLayout');
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// because the hierarchical system needs it's own physics and smooth curve settings, we adapt the other options if needed.
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return this.adaptAllOptionsForHierarchicalLayout(allOptions);
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}
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else {
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if (prevHierarchicalState === true) {
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// refresh the overridden options for nodes and edges.
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this.body.emitter.emit('refresh');
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return util.deepExtend(allOptions,this.optionsBackup);
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}
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}
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}
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return allOptions;
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}
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adaptAllOptionsForHierarchicalLayout(allOptions) {
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if (this.options.hierarchical.enabled === true) {
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// set the physics
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if (allOptions.physics === undefined || allOptions.physics === true) {
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allOptions.physics = {
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enabled:this.optionsBackup.physics.enabled === undefined ? true : this.optionsBackup.physics.enabled,
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solver:'hierarchicalRepulsion'
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};
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this.optionsBackup.physics.enabled = this.optionsBackup.physics.enabled === undefined ? true : this.optionsBackup.physics.enabled;
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this.optionsBackup.physics.solver = this.optionsBackup.physics.solver || 'barnesHut';
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}
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else if (typeof allOptions.physics === 'object') {
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this.optionsBackup.physics.enabled = allOptions.physics.enabled === undefined ? true : allOptions.physics.enabled;
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this.optionsBackup.physics.solver = allOptions.physics.solver || 'barnesHut';
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allOptions.physics.solver = 'hierarchicalRepulsion';
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}
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else if (allOptions.physics !== false) {
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this.optionsBackup.physics.solver ='barnesHut';
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allOptions.physics = {solver:'hierarchicalRepulsion'};
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}
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// get the type of static smooth curve in case it is required
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let type = 'horizontal';
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if (this.options.hierarchical.direction === 'RL' || this.options.hierarchical.direction === 'LR') {
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type = 'vertical';
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}
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// disable smooth curves if nothing is defined. If smooth curves have been turned on, turn them into static smooth curves.
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if (allOptions.edges === undefined) {
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this.optionsBackup.edges = {smooth:{enabled:true, type:'dynamic'}};
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allOptions.edges = {smooth: false};
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}
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else if (allOptions.edges.smooth === undefined) {
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this.optionsBackup.edges = {smooth:{enabled:true, type:'dynamic'}};
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allOptions.edges.smooth = false;
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}
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else {
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if (typeof allOptions.edges.smooth === 'boolean') {
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this.optionsBackup.edges = {smooth:allOptions.edges.smooth};
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allOptions.edges.smooth = {enabled: allOptions.edges.smooth, type:type}
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}
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else {
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// allow custom types except for dynamic
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if (allOptions.edges.smooth.type !== undefined && allOptions.edges.smooth.type !== 'dynamic') {
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type = allOptions.edges.smooth.type;
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}
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this.optionsBackup.edges = {
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smooth: allOptions.edges.smooth.enabled === undefined ? true : allOptions.edges.smooth.enabled,
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type: allOptions.edges.smooth.type === undefined ? 'dynamic' : allOptions.edges.smooth.type,
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roundness: allOptions.edges.smooth.roundness === undefined ? 0.5 : allOptions.edges.smooth.roundness,
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forceDirection: allOptions.edges.smooth.forceDirection === undefined ? false : allOptions.edges.smooth.forceDirection
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};
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allOptions.edges.smooth = {
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enabled: allOptions.edges.smooth.enabled === undefined ? true : allOptions.edges.smooth.enabled,
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type:type,
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roundness: allOptions.edges.smooth.roundness === undefined ? 0.5 : allOptions.edges.smooth.roundness,
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forceDirection: allOptions.edges.smooth.forceDirection === undefined ? false : allOptions.edges.smooth.forceDirection
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}
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}
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}
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// force all edges into static smooth curves. Only applies to edges that do not use the global options for smooth.
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this.body.emitter.emit('_forceDisableDynamicCurves', type);
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}
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console.log(JSON.stringify(allOptions), JSON.stringify(this.optionsBackup));
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return allOptions;
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}
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seededRandom() {
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let x = Math.sin(this.randomSeed++) * 10000;
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return x - Math.floor(x);
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}
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positionInitially(nodesArray) {
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if (this.options.hierarchical.enabled !== true) {
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this.randomSeed = this.initialRandomSeed;
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for (let i = 0; i < nodesArray.length; i++) {
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let node = nodesArray[i];
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let radius = 10 * 0.1 * nodesArray.length + 10;
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let angle = 2 * Math.PI * this.seededRandom();
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if (node.x === undefined) {
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node.x = radius * Math.cos(angle);
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}
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if (node.y === undefined) {
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node.y = radius * Math.sin(angle);
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}
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}
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}
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}
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/**
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* Use Kamada Kawai to position nodes. This is quite a heavy algorithm so if there are a lot of nodes we
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* cluster them first to reduce the amount.
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*/
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layoutNetwork() {
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if (this.options.hierarchical.enabled !== true && this.options.improvedLayout === true) {
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// first check if we should Kamada Kawai to layout. The threshold is if less than half of the visible
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// nodes have predefined positions we use this.
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let positionDefined = 0;
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for (let i = 0; i < this.body.nodeIndices.length; i++) {
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let node = this.body.nodes[this.body.nodeIndices[i]];
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if (node.predefinedPosition === true) {
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positionDefined += 1;
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}
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}
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// if less than half of the nodes have a predefined position we continue
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if (positionDefined < 0.5 * this.body.nodeIndices.length) {
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let MAX_LEVELS = 10;
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let level = 0;
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let clusterThreshold = 100;
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// if there are a lot of nodes, we cluster before we run the algorithm.
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if (this.body.nodeIndices.length > clusterThreshold) {
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let startLength = this.body.nodeIndices.length;
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while (this.body.nodeIndices.length > clusterThreshold) {
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//console.time("clustering")
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level += 1;
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let before = this.body.nodeIndices.length;
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// if there are many nodes we do a hubsize cluster
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if (level % 3 === 0) {
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this.body.modules.clustering.clusterBridges();
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}
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else {
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this.body.modules.clustering.clusterOutliers();
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}
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let after = this.body.nodeIndices.length;
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if ((before == after && level % 3 !== 0) || level > MAX_LEVELS) {
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this._declusterAll();
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this.body.emitter.emit("_layoutFailed");
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console.info("This network could not be positioned by this version of the improved layout algorithm. Please disable improvedLayout for better performance.");
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return;
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}
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//console.timeEnd("clustering")
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//console.log(level,after)
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}
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// increase the size of the edges
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this.body.modules.kamadaKawai.setOptions({springLength: Math.max(150, 2 * startLength)})
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}
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// position the system for these nodes and edges
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this.body.modules.kamadaKawai.solve(this.body.nodeIndices, this.body.edgeIndices, true);
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// shift to center point
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this._shiftToCenter();
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// perturb the nodes a little bit to force the physics to kick in
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let offset = 70;
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for (let i = 0; i < this.body.nodeIndices.length; i++) {
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this.body.nodes[this.body.nodeIndices[i]].x += (0.5 - this.seededRandom())*offset;
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this.body.nodes[this.body.nodeIndices[i]].y += (0.5 - this.seededRandom())*offset;
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}
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// uncluster all clusters
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this._declusterAll();
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// reposition all bezier nodes.
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this.body.emitter.emit("_repositionBezierNodes");
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}
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}
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}
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/**
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* Move all the nodes towards to the center so gravitational pull wil not move the nodes away from view
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* @private
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*/
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_shiftToCenter() {
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let range = NetworkUtil.getRangeCore(this.body.nodes, this.body.nodeIndices);
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let center = NetworkUtil.findCenter(range);
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for (let i = 0; i < this.body.nodeIndices.length; i++) {
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this.body.nodes[this.body.nodeIndices[i]].x -= center.x;
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this.body.nodes[this.body.nodeIndices[i]].y -= center.y;
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}
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}
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_declusterAll() {
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let clustersPresent = true;
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while (clustersPresent === true) {
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clustersPresent = false;
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for (let i = 0; i < this.body.nodeIndices.length; i++) {
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if (this.body.nodes[this.body.nodeIndices[i]].isCluster === true) {
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clustersPresent = true;
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this.body.modules.clustering.openCluster(this.body.nodeIndices[i], {}, false);
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}
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}
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if (clustersPresent === true) {
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this.body.emitter.emit('_dataChanged');
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}
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}
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}
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getSeed() {
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return this.initialRandomSeed;
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}
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/**
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* This is the main function to layout the nodes in a hierarchical way.
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* It checks if the node details are supplied correctly
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*
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* @private
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*/
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setupHierarchicalLayout() {
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if (this.options.hierarchical.enabled === true && this.body.nodeIndices.length > 0) {
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// get the size of the largest hubs and check if the user has defined a level for a node.
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let node, nodeId;
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let definedLevel = false;
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let definedPositions = true;
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let undefinedLevel = false;
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this.hierarchicalLevels = {};
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this.lastNodeOnLevel = {};
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this.hierarchicalParents = {};
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this.hierarchicalChildren = {};
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this.hierarchicalTrees = {};
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this.treeIndex = -1;
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this.distributionOrdering = {};
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this.distributionIndex = {};
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this.distributionOrderingPresence = {};
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for (nodeId in this.body.nodes) {
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if (this.body.nodes.hasOwnProperty(nodeId)) {
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node = this.body.nodes[nodeId];
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if (node.options.x === undefined && node.options.y === undefined) {
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definedPositions = false;
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}
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if (node.options.level !== undefined) {
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definedLevel = true;
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this.hierarchicalLevels[nodeId] = node.options.level;
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}
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else {
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undefinedLevel = true;
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}
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}
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}
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// if the user defined some levels but not all, alert and run without hierarchical layout
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if (undefinedLevel === true && definedLevel === true) {
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throw new Error('To use the hierarchical layout, nodes require either no predefined levels or levels have to be defined for all nodes.');
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return;
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}
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else {
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// define levels if undefined by the users. Based on hubsize.
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if (undefinedLevel === true) {
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if (this.options.hierarchical.sortMethod === 'hubsize') {
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this._determineLevelsByHubsize();
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}
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else if (this.options.hierarchical.sortMethod === 'directed') {
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this._determineLevelsDirected();
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}
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else if (this.options.hierarchical.sortMethod === 'custom') {
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this._determineLevelsCustomCallback();
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}
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}
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// check the distribution of the nodes per level.
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let distribution = this._getDistribution();
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// get the parent children relations.
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this._generateMap();
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// place the nodes on the canvas.
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this._placeNodesByHierarchy(distribution);
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// condense the whitespace.
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this._condenseHierarchy();
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// shift to center so gravity does not have to do much
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this._shiftToCenter();
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}
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}
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}
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/**
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* @private
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*/
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_condenseHierarchy() {
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// Global var in this scope to define when the movement has stopped.
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let stillShifting = false;
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let branches = {};
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// first we have some methods to help shifting trees around.
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// the main method to shift the trees
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let shiftTrees = () => {
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let treeSizes = getTreeSizes();
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for (let i = 0; i < treeSizes.length - 1; i++) {
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let diff = treeSizes[i].max - treeSizes[i+1].min;
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if (diff !== this.options.hierarchical.treeSpacing) {
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shiftTree(i + 1, diff - this.options.hierarchical.treeSpacing);
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}
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}
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};
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// shift a single tree by an offset
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let shiftTree = (index, offset) => {
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for (let nodeId in this.hierarchicalTrees) {
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if (this.hierarchicalTrees.hasOwnProperty(nodeId)) {
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if (this.hierarchicalTrees[nodeId] === index) {
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this._setPositionForHierarchy(this.body.nodes[nodeId], offset, undefined, true);
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}
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}
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}
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};
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// get the width of a tree
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let getTreeSize = (index) => {
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let min = 1e9;
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let max = -1e9;
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for (let nodeId in this.hierarchicalTrees) {
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if (this.hierarchicalTrees.hasOwnProperty(nodeId)) {
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if (this.hierarchicalTrees[nodeId] === index) {
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let pos = this._getPositionForHierarchy(this.body.nodes[nodeId]);
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min = Math.min(pos, min);
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max = Math.max(pos, max);
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}
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}
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}
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return [min, max];
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};
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// get the width of all trees
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let getTreeSizes = () => {
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let treeWidths = [];
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for (let i = 0; i < this.treeIndex; i++) {
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treeWidths.push(getTreeSize(i));
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}
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return treeWidths;
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};
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// get a map of all nodes in this branch
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let getBranchNodes = (source, map) => {
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map[source.id] = true;
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if (this.hierarchicalParents[source.id]) {
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let children = this.hierarchicalParents[source.id].children;
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if (children.length > 0) {
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for (let i = 0; i < children.length; i++) {
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getBranchNodes(this.body.nodes[children[i]], map);
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}
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}
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}
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};
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// get a min max width as well as the maximum movement space it has on either sides
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// we use min max terminology because width and height can interchange depending on the direction of the layout
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let getBranchBoundary = (branchMap, maxLevel = 1e9) => {
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let minSpace = 1e9;
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let maxSpace = 1e9;
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let min = 1e9;
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let max = -1e9;
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for (let branchNode in branchMap) {
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if (branchMap.hasOwnProperty(branchNode)) {
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let node = this.body.nodes[branchNode];
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let level = this.hierarchicalLevels[node.id];
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let position = this._getPositionForHierarchy(node);
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// get the space around the node.
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let [minSpaceNode, maxSpaceNode] = this._getSpaceAroundNode(node,branchMap);
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minSpace = Math.min(minSpaceNode, minSpace);
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maxSpace = Math.min(maxSpaceNode, maxSpace);
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// the width is only relevant for the levels two nodes have in common. This is why we filter on this.
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if (level <= maxLevel) {
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min = Math.min(position, min);
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max = Math.max(position, max);
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}
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}
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}
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return [min, max, minSpace, maxSpace];
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};
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// get the maximum level of a branch.
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let getMaxLevel = (nodeId) => {
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let level = this.hierarchicalLevels[nodeId];
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if (this.hierarchicalParents[nodeId]) {
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let children = this.hierarchicalParents[nodeId].children;
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if (children.length > 0) {
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for (let i = 0; i < children.length; i++) {
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level = Math.max(level,getMaxLevel(children[i]));
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}
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}
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}
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return level;
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};
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// check what the maximum level is these nodes have in common.
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let getCollisionLevel = (node1, node2) => {
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let maxLevel1 = getMaxLevel(node1.id);
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let maxLevel2 = getMaxLevel(node2.id);
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return Math.min(maxLevel1, maxLevel2);
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};
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// check if two nodes have the same parent(s)
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let hasSameParent = (node1, node2) => {
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let parents1 = this.hierarchicalChildren[node1.id];
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let parents2 = this.hierarchicalChildren[node2.id];
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if (parents1 === undefined || parents2 === undefined) {
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return false;
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}
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parents1 = parents1.parents;
|
|
parents2 = parents2.parents;
|
|
for (let i = 0; i < parents1.length; i++) {
|
|
for (let j = 0; j < parents2.length; j++) {
|
|
if (parents1[i] == parents2[j]) {
|
|
return true;
|
|
}
|
|
}
|
|
}
|
|
return false;
|
|
};
|
|
|
|
// condense elements. These can be nodes or branches depending on the callback.
|
|
let shiftElementsCloser = (callback, levels, centerParents) => {
|
|
for (let i = 0; i < levels.length; i++) {
|
|
let level = levels[i];
|
|
let levelNodes = this.distributionOrdering[level];
|
|
if (levelNodes.length > 1) {
|
|
for (let j = 0; j < levelNodes.length - 1; j++) {
|
|
if (hasSameParent(levelNodes[j],levelNodes[j+1]) === true) {
|
|
if (this.hierarchicalTrees[levelNodes[j].id] === this.hierarchicalTrees[levelNodes[j+1].id]) {
|
|
callback(levelNodes[j],levelNodes[j+1], centerParents);
|
|
}
|
|
}}
|
|
}
|
|
}
|
|
};
|
|
|
|
// callback for shifting branches
|
|
let branchShiftCallback = (node1, node2, centerParent = false) => {
|
|
//window.CALLBACKS.push(() => {
|
|
let pos1 = this._getPositionForHierarchy(node1);
|
|
let pos2 = this._getPositionForHierarchy(node2);
|
|
let diffAbs = Math.abs(pos2 - pos1);
|
|
//console.log("NOW CHEcKING:", node1.id, node2.id, diffAbs);
|
|
if (diffAbs > this.options.hierarchical.nodeSpacing) {
|
|
let branchNodes1 = {}; branchNodes1[node1.id] = true;
|
|
let branchNodes2 = {}; branchNodes2[node2.id] = true;
|
|
|
|
getBranchNodes(node1, branchNodes1);
|
|
getBranchNodes(node2, branchNodes2);
|
|
|
|
// check the largest distance between the branches
|
|
let maxLevel = getCollisionLevel(node1, node2);
|
|
let [min1,max1, minSpace1, maxSpace1] = getBranchBoundary(branchNodes1, maxLevel);
|
|
let [min2,max2, minSpace2, maxSpace2] = getBranchBoundary(branchNodes2, maxLevel);
|
|
|
|
//console.log(node1.id, getBranchBoundary(branchNodes1, maxLevel), node2.id, getBranchBoundary(branchNodes2, maxLevel), maxLevel);
|
|
let diffBranch = Math.abs(max1 - min2);
|
|
if (diffBranch > this.options.hierarchical.nodeSpacing) {
|
|
let offset = max1 - min2 + this.options.hierarchical.nodeSpacing;
|
|
if (offset < -minSpace2 + this.options.hierarchical.nodeSpacing) {
|
|
offset = -minSpace2 + this.options.hierarchical.nodeSpacing;
|
|
//console.log("RESETTING OFFSET", max1 - min2 + this.options.hierarchical.nodeSpacing, -minSpace2, offset);
|
|
}
|
|
if (offset < 0) {
|
|
//console.log("SHIFTING", node2.id, offset);
|
|
this._shiftBlock(node2.id, offset);
|
|
stillShifting = true;
|
|
|
|
if (centerParent === true)
|
|
this._centerParent(node2);
|
|
}
|
|
}
|
|
|
|
}
|
|
//this.body.emitter.emit("_redraw");})
|
|
};
|
|
|
|
let minimizeEdgeLength = (iterations, node) => {
|
|
//window.CALLBACKS.push(() => {
|
|
// console.log("ts",node.id);
|
|
let nodeId = node.id;
|
|
let allEdges = node.edges;
|
|
let nodeLevel = this.hierarchicalLevels[node.id];
|
|
|
|
// gather constants
|
|
let C2 = this.options.hierarchical.levelSeparation * this.options.hierarchical.levelSeparation;
|
|
let referenceNodes = {};
|
|
let aboveEdges = [];
|
|
for (let i = 0; i < allEdges.length; i++) {
|
|
let edge = allEdges[i];
|
|
if (edge.toId != edge.fromId) {
|
|
let otherNode = edge.toId == nodeId ? edge.from : edge.to;
|
|
referenceNodes[allEdges[i].id] = otherNode;
|
|
if (this.hierarchicalLevels[otherNode.id] < nodeLevel) {
|
|
aboveEdges.push(edge);
|
|
}
|
|
}
|
|
}
|
|
|
|
// differentiated sum of lengths based on only moving one node over one axis
|
|
let getFx = (point, edges) => {
|
|
let sum = 0;
|
|
for (let i = 0; i < edges.length; i++) {
|
|
if (referenceNodes[edges[i].id] !== undefined) {
|
|
let a = this._getPositionForHierarchy(referenceNodes[edges[i].id]) - point;
|
|
sum += a / Math.sqrt(a * a + C2);
|
|
}
|
|
}
|
|
return sum;
|
|
};
|
|
|
|
// doubly differentiated sum of lengths based on only moving one node over one axis
|
|
let getDFx = (point, edges) => {
|
|
let sum = 0;
|
|
for (let i = 0; i < edges.length; i++) {
|
|
if (referenceNodes[edges[i].id] !== undefined) {
|
|
let a = this._getPositionForHierarchy(referenceNodes[edges[i].id]) - point;
|
|
sum -= (C2 * Math.pow(a * a + C2, -1.5));
|
|
}
|
|
}
|
|
return sum;
|
|
};
|
|
|
|
let getGuess = (iterations, edges) => {
|
|
let guess = this._getPositionForHierarchy(node);
|
|
// Newton's method for optimization
|
|
let guessMap = {};
|
|
for (let i = 0; i < iterations; i++) {
|
|
let fx = getFx(guess, edges);
|
|
let dfx = getDFx(guess, edges);
|
|
|
|
// we limit the movement to avoid instability.
|
|
let limit = 40;
|
|
let ratio = Math.max(-limit, Math.min(limit, Math.round(fx/dfx)));
|
|
guess = guess - ratio;
|
|
// reduce duplicates
|
|
if (guessMap[guess] !== undefined) {
|
|
break;
|
|
}
|
|
guessMap[guess] = i;
|
|
}
|
|
return guess;
|
|
};
|
|
|
|
let moveBranch = (guess) => {
|
|
// position node if there is space
|
|
let nodePosition = this._getPositionForHierarchy(node);
|
|
|
|
// check movable area of the branch
|
|
if (branches[node.id] === undefined) {
|
|
let branchNodes = {};
|
|
branchNodes[node.id] = true;
|
|
getBranchNodes(node, branchNodes);
|
|
branches[node.id] = branchNodes;
|
|
}
|
|
let [minBranch, maxBranch, minSpaceBranch, maxSpaceBranch] = getBranchBoundary(branches[node.id]);
|
|
|
|
let diff = guess - nodePosition;
|
|
|
|
// check if we are allowed to move the node:
|
|
let branchOffset = 0;
|
|
if (diff > 0) {
|
|
branchOffset = Math.min(diff, maxSpaceBranch - this.options.hierarchical.nodeSpacing);
|
|
}
|
|
else if (diff < 0) {
|
|
branchOffset = -Math.min(-diff, minSpaceBranch - this.options.hierarchical.nodeSpacing);
|
|
}
|
|
|
|
if (branchOffset != 0) {
|
|
//console.log("moving branch:",branchOffset, maxSpaceBranch, minSpaceBranch)
|
|
this._shiftBlock(node.id, branchOffset);
|
|
//this.body.emitter.emit("_redraw");
|
|
stillShifting = true;
|
|
}
|
|
};
|
|
|
|
let moveNode = (guess) => {
|
|
let nodePosition = this._getPositionForHierarchy(node);
|
|
|
|
// position node if there is space
|
|
let [minSpace, maxSpace] = this._getSpaceAroundNode(node);
|
|
let diff = guess - nodePosition;
|
|
// check if we are allowed to move the node:
|
|
let newPosition = nodePosition;
|
|
if (diff > 0) {
|
|
newPosition = Math.min(nodePosition + (maxSpace - this.options.hierarchical.nodeSpacing), guess);
|
|
}
|
|
else if (diff < 0) {
|
|
newPosition = Math.max(nodePosition - (minSpace - this.options.hierarchical.nodeSpacing), guess);
|
|
}
|
|
|
|
if (newPosition !== nodePosition) {
|
|
//console.log("moving Node:",diff, minSpace, maxSpace)
|
|
this._setPositionForHierarchy(node, newPosition, undefined, true);
|
|
//this.body.emitter.emit("_redraw");
|
|
stillShifting = true;
|
|
}
|
|
};
|
|
|
|
let guess = getGuess(iterations, aboveEdges);
|
|
moveBranch(guess);
|
|
guess = getGuess(iterations, allEdges);
|
|
moveNode(guess);
|
|
//})
|
|
};
|
|
|
|
// method to remove whitespace between branches. Because we do bottom up, we can center the parents.
|
|
let minimizeEdgeLengthBottomUp = (iterations) => {
|
|
let levels = Object.keys(this.distributionOrdering);
|
|
levels = levels.reverse();
|
|
for (let i = 0; i < iterations; i++) {
|
|
stillShifting = false;
|
|
for (let j = 0; j < levels.length; j++) {
|
|
let level = levels[j];
|
|
let levelNodes = this.distributionOrdering[level];
|
|
for (let k = 0; k < levelNodes.length; k++) {
|
|
minimizeEdgeLength(1000, levelNodes[k]);
|
|
}
|
|
}
|
|
if (stillShifting !== true) {
|
|
//console.log("FINISHED minimizeEdgeLengthBottomUp IN " + i);
|
|
break;
|
|
}
|
|
}
|
|
};
|
|
|
|
//// method to remove whitespace between branches. Because we do bottom up, we can center the parents.
|
|
let shiftBranchesCloserBottomUp = (iterations) => {
|
|
let levels = Object.keys(this.distributionOrdering);
|
|
levels = levels.reverse();
|
|
for (let i = 0; i < iterations; i++) {
|
|
stillShifting = false;
|
|
shiftElementsCloser(branchShiftCallback, levels, true);
|
|
if (stillShifting !== true) {
|
|
//console.log("FINISHED shiftBranchesCloserBottomUp IN " + (i+1));
|
|
break;
|
|
}
|
|
}
|
|
};
|
|
|
|
// center all parents
|
|
let centerAllParents = () => {
|
|
for (let nodeId in this.body.nodes) {
|
|
if (this.body.nodes.hasOwnProperty(nodeId))
|
|
this._centerParent(this.body.nodes[nodeId]);
|
|
}
|
|
};
|
|
|
|
// the actual work is done here.
|
|
if (this.options.hierarchical.blockShifting === true) {
|
|
shiftBranchesCloserBottomUp(5);
|
|
centerAllParents();
|
|
}
|
|
|
|
// minimize edge length
|
|
if (this.options.hierarchical.edgeMinimization === true) {
|
|
minimizeEdgeLengthBottomUp(20);
|
|
}
|
|
|
|
shiftTrees();
|
|
}
|
|
|
|
/**
|
|
* This gives the space around the node. IF a map is supplied, it will only check against nodes NOT in the map.
|
|
* This is used to only get the distances to nodes outside of a branch.
|
|
* @param node
|
|
* @param map
|
|
* @returns {*[]}
|
|
* @private
|
|
*/
|
|
_getSpaceAroundNode(node, map) {
|
|
let useMap = true;
|
|
if (map === undefined) {
|
|
useMap = false;
|
|
}
|
|
let level = this.hierarchicalLevels[node.id];
|
|
let index = this.distributionIndex[node.id];
|
|
let position = this._getPositionForHierarchy(node);
|
|
let minSpace = 1e9;
|
|
let maxSpace = 1e9;
|
|
if (index !== 0) {
|
|
let prevNode = this.distributionOrdering[level][index - 1];
|
|
if ((useMap === true && map[prevNode.id] === undefined) || useMap === false) {
|
|
let prevPos = this._getPositionForHierarchy(prevNode);
|
|
minSpace = position - prevPos;
|
|
}
|
|
}
|
|
|
|
if (index != this.distributionOrdering[level].length - 1) {
|
|
let nextNode = this.distributionOrdering[level][index + 1];
|
|
if ((useMap === true && map[nextNode.id] === undefined) || useMap === false) {
|
|
let nextPos = this._getPositionForHierarchy(nextNode);
|
|
maxSpace = Math.min(maxSpace, nextPos - position);
|
|
}
|
|
}
|
|
|
|
return [minSpace, maxSpace];
|
|
}
|
|
|
|
/**
|
|
* We use this method to center a parent node and check if it does not cross other nodes when it does.
|
|
* @param node
|
|
* @private
|
|
*/
|
|
_centerParent(node) {
|
|
if (this.hierarchicalChildren[node.id]) {
|
|
let parents = this.hierarchicalChildren[node.id].parents;
|
|
for (var i = 0; i < parents.length; i++) {
|
|
let parentId = parents[i];
|
|
let parentNode = this.body.nodes[parentId];
|
|
if (this.hierarchicalParents[parentId]) {
|
|
// get the range of the children
|
|
let minPos = 1e9;
|
|
let maxPos = -1e9;
|
|
let children = this.hierarchicalParents[parentId].children;
|
|
if (children.length > 0) {
|
|
for (let i = 0; i < children.length; i++) {
|
|
let childNode = this.body.nodes[children[i]];
|
|
minPos = Math.min(minPos, this._getPositionForHierarchy(childNode));
|
|
maxPos = Math.max(maxPos, this._getPositionForHierarchy(childNode));
|
|
}
|
|
}
|
|
|
|
let position = this._getPositionForHierarchy(parentNode);
|
|
let [minSpace, maxSpace] = this._getSpaceAroundNode(parentNode);
|
|
let newPosition = 0.5 * (minPos + maxPos);
|
|
let diff = position - newPosition;
|
|
if ((diff < 0 && Math.abs(diff) < maxSpace - this.options.hierarchical.nodeSpacing) || (diff > 0 && Math.abs(diff) < minSpace - this.options.hierarchical.nodeSpacing)) {
|
|
this._setPositionForHierarchy(parentNode, newPosition, undefined, true);
|
|
}
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
|
|
|
|
/**
|
|
* This function places the nodes on the canvas based on the hierarchial distribution.
|
|
*
|
|
* @param {Object} distribution | obtained by the function this._getDistribution()
|
|
* @private
|
|
*/
|
|
_placeNodesByHierarchy(distribution) {
|
|
this.positionedNodes = {};
|
|
// start placing all the level 0 nodes first. Then recursively position their branches.
|
|
for (let level in distribution) {
|
|
if (distribution.hasOwnProperty(level)) {
|
|
// sort nodes in level by position:
|
|
let nodeArray = Object.keys(distribution[level]);
|
|
nodeArray = this._indexArrayToNodes(nodeArray);
|
|
this._sortNodeArray(nodeArray);
|
|
|
|
for (let i = 0; i < nodeArray.length; i++) {
|
|
let node = nodeArray[i];
|
|
if (this.positionedNodes[node.id] === undefined) {
|
|
this._setPositionForHierarchy(node, this.options.hierarchical.nodeSpacing * i, level);
|
|
this.positionedNodes[node.id] = true;
|
|
this._placeBranchNodes(node.id, level);
|
|
}
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
/**
|
|
* Receives an array with node indices and returns an array with the actual node references. Used for sorting based on
|
|
* node properties.
|
|
* @param idArray
|
|
*/
|
|
_indexArrayToNodes(idArray) {
|
|
let array = [];
|
|
for (let i = 0; i < idArray.length; i++) {
|
|
array.push(this.body.nodes[idArray[i]])
|
|
}
|
|
return array;
|
|
}
|
|
|
|
/**
|
|
* This function get the distribution of levels based on hubsize
|
|
*
|
|
* @returns {Object}
|
|
* @private
|
|
*/
|
|
_getDistribution() {
|
|
let distribution = {};
|
|
let nodeId, node;
|
|
|
|
// we fix Y because the hierarchy is vertical, we fix X so we do not give a node an x position for a second time.
|
|
// the fix of X is removed after the x value has been set.
|
|
for (nodeId in this.body.nodes) {
|
|
if (this.body.nodes.hasOwnProperty(nodeId)) {
|
|
node = this.body.nodes[nodeId];
|
|
let level = this.hierarchicalLevels[nodeId] === undefined ? 0 : this.hierarchicalLevels[nodeId];
|
|
if (this.options.hierarchical.direction === 'UD' || this.options.hierarchical.direction === 'DU') {
|
|
node.y = this.options.hierarchical.levelSeparation * level;
|
|
node.options.fixed.y = true;
|
|
}
|
|
else {
|
|
node.x = this.options.hierarchical.levelSeparation * level;
|
|
node.options.fixed.x = true;
|
|
}
|
|
if (distribution[level] === undefined) {
|
|
distribution[level] = {};
|
|
}
|
|
distribution[level][nodeId] = node;
|
|
}
|
|
}
|
|
return distribution;
|
|
}
|
|
|
|
|
|
/**
|
|
* Get the hubsize from all remaining unlevelled nodes.
|
|
*
|
|
* @returns {number}
|
|
* @private
|
|
*/
|
|
_getHubSize() {
|
|
let hubSize = 0;
|
|
for (let nodeId in this.body.nodes) {
|
|
if (this.body.nodes.hasOwnProperty(nodeId)) {
|
|
let node = this.body.nodes[nodeId];
|
|
if (this.hierarchicalLevels[nodeId] === undefined) {
|
|
hubSize = node.edges.length < hubSize ? hubSize : node.edges.length;
|
|
}
|
|
}
|
|
}
|
|
return hubSize;
|
|
}
|
|
|
|
|
|
/**
|
|
* this function allocates nodes in levels based on the recursive branching from the largest hubs.
|
|
*
|
|
* @param hubsize
|
|
* @private
|
|
*/
|
|
_determineLevelsByHubsize() {
|
|
let hubSize = 1;
|
|
|
|
let levelDownstream = (nodeA, nodeB) => {
|
|
if (this.hierarchicalLevels[nodeB.id] === undefined) {
|
|
// set initial level
|
|
if (this.hierarchicalLevels[nodeA.id] === undefined) {
|
|
this.hierarchicalLevels[nodeA.id] = 0;
|
|
}
|
|
// set level
|
|
this.hierarchicalLevels[nodeB.id] = this.hierarchicalLevels[nodeA.id] + 1;
|
|
}
|
|
};
|
|
|
|
while (hubSize > 0) {
|
|
// determine hubs
|
|
hubSize = this._getHubSize();
|
|
if (hubSize === 0)
|
|
break;
|
|
|
|
for (let nodeId in this.body.nodes) {
|
|
if (this.body.nodes.hasOwnProperty(nodeId)) {
|
|
let node = this.body.nodes[nodeId];
|
|
if (node.edges.length === hubSize) {
|
|
this._crawlNetwork(levelDownstream,nodeId);
|
|
}
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
/**
|
|
* TODO: release feature
|
|
* @private
|
|
*/
|
|
_determineLevelsCustomCallback() {
|
|
let minLevel = 100000;
|
|
|
|
// TODO: this should come from options.
|
|
let customCallback = function(nodeA, nodeB, edge) {
|
|
|
|
};
|
|
|
|
let levelByDirection = (nodeA, nodeB, edge) => {
|
|
let levelA = this.hierarchicalLevels[nodeA.id];
|
|
// set initial level
|
|
if (levelA === undefined) {this.hierarchicalLevels[nodeA.id] = minLevel;}
|
|
|
|
let diff = customCallback(
|
|
NetworkUtil.cloneOptions(nodeA,'node'),
|
|
NetworkUtil.cloneOptions(nodeB,'node'),
|
|
NetworkUtil.cloneOptions(edge,'edge')
|
|
);
|
|
|
|
this.hierarchicalLevels[nodeB.id] = this.hierarchicalLevels[nodeA.id] + diff;
|
|
};
|
|
|
|
this._crawlNetwork(levelByDirection);
|
|
this._setMinLevelToZero();
|
|
}
|
|
|
|
/**
|
|
* this function allocates nodes in levels based on the direction of the edges
|
|
*
|
|
* @param hubsize
|
|
* @private
|
|
*/
|
|
_determineLevelsDirected() {
|
|
let minLevel = 10000;
|
|
let levelByDirection = (nodeA, nodeB, edge) => {
|
|
let levelA = this.hierarchicalLevels[nodeA.id];
|
|
// set initial level
|
|
if (levelA === undefined) {this.hierarchicalLevels[nodeA.id] = minLevel;}
|
|
if (edge.toId == nodeB.id) {
|
|
this.hierarchicalLevels[nodeB.id] = this.hierarchicalLevels[nodeA.id] + 1;
|
|
}
|
|
else {
|
|
this.hierarchicalLevels[nodeB.id] = this.hierarchicalLevels[nodeA.id] - 1;
|
|
}
|
|
};
|
|
this._crawlNetwork(levelByDirection);
|
|
this._setMinLevelToZero();
|
|
}
|
|
|
|
|
|
/**
|
|
* Small util method to set the minimum levels of the nodes to zero.
|
|
* @private
|
|
*/
|
|
_setMinLevelToZero() {
|
|
let minLevel = 1e9;
|
|
// get the minimum level
|
|
for (let nodeId in this.body.nodes) {
|
|
if (this.body.nodes.hasOwnProperty(nodeId)) {
|
|
minLevel = Math.min(this.hierarchicalLevels[nodeId], minLevel);
|
|
}
|
|
}
|
|
|
|
// subtract the minimum from the set so we have a range starting from 0
|
|
for (let nodeId in this.body.nodes) {
|
|
if (this.body.nodes.hasOwnProperty(nodeId)) {
|
|
this.hierarchicalLevels[nodeId] -= minLevel;
|
|
}
|
|
}
|
|
}
|
|
|
|
|
|
/**
|
|
* Update the bookkeeping of parent and child.
|
|
* @private
|
|
*/
|
|
_generateMap() {
|
|
let fillInRelations = (parentNode, childNode) => {
|
|
if (this.hierarchicalLevels[childNode.id] > this.hierarchicalLevels[parentNode.id]) {
|
|
let parentNodeId = parentNode.id;
|
|
let childNodeId = childNode.id;
|
|
if (this.hierarchicalParents[parentNodeId] === undefined) {
|
|
this.hierarchicalParents[parentNodeId] = {children: [], amount: 0};
|
|
}
|
|
this.hierarchicalParents[parentNodeId].children.push(childNodeId);
|
|
if (this.hierarchicalChildren[childNodeId] === undefined) {
|
|
this.hierarchicalChildren[childNodeId] = {parents: [], amount: 0};
|
|
}
|
|
this.hierarchicalChildren[childNodeId].parents.push(parentNodeId);
|
|
}
|
|
};
|
|
|
|
this._crawlNetwork(fillInRelations);
|
|
}
|
|
|
|
|
|
/**
|
|
* Crawl over the entire network and use a callback on each node couple that is connected to each other.
|
|
* @param callback | will receive nodeA nodeB and the connecting edge. A and B are unique.
|
|
* @param startingNodeId
|
|
* @private
|
|
*/
|
|
_crawlNetwork(callback = function() {}, startingNodeId) {
|
|
let progress = {};
|
|
let crawler = (node) => {
|
|
if (progress[node.id] === undefined) {
|
|
progress[node.id] = true;
|
|
let childNode;
|
|
for (let i = 0; i < node.edges.length; i++) {
|
|
if (node.edges[i].toId === node.id) {childNode = node.edges[i].from;}
|
|
else {childNode = node.edges[i].to;}
|
|
|
|
if (node.id !== childNode.id) {
|
|
callback(node, childNode, node.edges[i]);
|
|
crawler(childNode);
|
|
}
|
|
}
|
|
}
|
|
};
|
|
|
|
|
|
// we can crawl from a specific node or over all nodes.
|
|
if (startingNodeId === undefined) {
|
|
for (let i = 0; i < this.body.nodeIndices.length; i++) {
|
|
let node = this.body.nodes[this.body.nodeIndices[i]];
|
|
crawler(node);
|
|
}
|
|
}
|
|
else {
|
|
let node = this.body.nodes[startingNodeId];
|
|
if (node === undefined) {
|
|
console.error("Node not found:", startingNodeId);
|
|
return;
|
|
}
|
|
crawler(node);
|
|
}
|
|
}
|
|
|
|
|
|
/**
|
|
* This is a recursively called function to enumerate the branches from the largest hubs and place the nodes
|
|
* on a X position that ensures there will be no overlap.
|
|
*
|
|
* @param parentId
|
|
* @param parentLevel
|
|
* @private
|
|
*/
|
|
_placeBranchNodes(parentId, parentLevel) {
|
|
// if this is not a parent, cancel the placing. This can happen with multiple parents to one child.
|
|
if (this.hierarchicalParents[parentId] === undefined) {
|
|
return;
|
|
}
|
|
|
|
// get a list of childNodes
|
|
let childNodes = [];
|
|
for (let i = 0; i < this.hierarchicalParents[parentId].children.length; i++) {
|
|
childNodes.push(this.body.nodes[this.hierarchicalParents[parentId].children[i]]);
|
|
}
|
|
|
|
// use the positions to order the nodes.
|
|
this._sortNodeArray(childNodes);
|
|
|
|
// position the childNodes
|
|
for (let i = 0; i < childNodes.length; i++) {
|
|
let childNode = childNodes[i];
|
|
let childNodeLevel = this.hierarchicalLevels[childNode.id];
|
|
// check if the child node is below the parent node and if it has already been positioned.
|
|
if (childNodeLevel > parentLevel && this.positionedNodes[childNode.id] === undefined) {
|
|
// get the amount of space required for this node. If parent the width is based on the amount of children.
|
|
let pos;
|
|
|
|
// we get the X or Y values we need and store them in pos and previousPos. The get and set make sure we get X or Y
|
|
if (i === 0) {pos = this._getPositionForHierarchy(this.body.nodes[parentId]);}
|
|
else {pos = this._getPositionForHierarchy(childNodes[i-1]) + this.options.hierarchical.nodeSpacing;}
|
|
this._setPositionForHierarchy(childNode, pos, childNodeLevel);
|
|
|
|
// if overlap has been detected, we shift the branch
|
|
if (this.lastNodeOnLevel[childNodeLevel] !== undefined) {
|
|
let previousPos = this._getPositionForHierarchy(this.body.nodes[this.lastNodeOnLevel[childNodeLevel]]);
|
|
if (pos - previousPos < this.options.hierarchical.nodeSpacing) {
|
|
let diff = (previousPos + this.options.hierarchical.nodeSpacing) - pos;
|
|
let sharedParent = this._findCommonParent(this.lastNodeOnLevel[childNodeLevel], childNode.id);
|
|
this._shiftBlock(sharedParent.withChild, diff);
|
|
}
|
|
}
|
|
|
|
// store change in position.
|
|
this.lastNodeOnLevel[childNodeLevel] = childNode.id;
|
|
|
|
this.positionedNodes[childNode.id] = true;
|
|
|
|
this._placeBranchNodes(childNode.id, childNodeLevel);
|
|
}
|
|
else {
|
|
return;
|
|
}
|
|
}
|
|
|
|
// center the parent nodes.
|
|
let minPos = 1e9;
|
|
let maxPos = -1e9;
|
|
for (let i = 0; i < childNodes.length; i++) {
|
|
let childNodeId = childNodes[i].id;
|
|
minPos = Math.min(minPos, this._getPositionForHierarchy(this.body.nodes[childNodeId]));
|
|
maxPos = Math.max(maxPos, this._getPositionForHierarchy(this.body.nodes[childNodeId]));
|
|
}
|
|
this._setPositionForHierarchy(this.body.nodes[parentId], 0.5 * (minPos + maxPos), parentLevel);
|
|
}
|
|
|
|
|
|
/**
|
|
* Shift a branch a certain distance
|
|
* @param parentId
|
|
* @param diff
|
|
* @private
|
|
*/
|
|
_shiftBlock(parentId, diff) {
|
|
if (this.options.hierarchical.direction === 'UD' || this.options.hierarchical.direction === 'DU') {
|
|
this.body.nodes[parentId].x += diff;
|
|
}
|
|
else {
|
|
this.body.nodes[parentId].y += diff;
|
|
}
|
|
if (this.hierarchicalParents[parentId] !== undefined) {
|
|
for (let i = 0; i < this.hierarchicalParents[parentId].children.length; i++) {
|
|
this._shiftBlock(this.hierarchicalParents[parentId].children[i], diff);
|
|
}
|
|
}
|
|
}
|
|
|
|
|
|
/**
|
|
* Find a common parent between branches.
|
|
* @param childA
|
|
* @param childB
|
|
* @returns {{foundParent, withChild}}
|
|
* @private
|
|
*/
|
|
_findCommonParent(childA,childB) {
|
|
let parents = {};
|
|
let iterateParents = (parents,child) => {
|
|
if (this.hierarchicalChildren[child] !== undefined) {
|
|
for (let i = 0; i < this.hierarchicalChildren[child].parents.length; i++) {
|
|
let parent = this.hierarchicalChildren[child].parents[i];
|
|
parents[parent] = true;
|
|
iterateParents(parents, parent)
|
|
}
|
|
}
|
|
};
|
|
let findParent = (parents, child) => {
|
|
if (this.hierarchicalChildren[child] !== undefined) {
|
|
for (let i = 0; i < this.hierarchicalChildren[child].parents.length; i++) {
|
|
let parent = this.hierarchicalChildren[child].parents[i];
|
|
if (parents[parent] !== undefined) {
|
|
return {foundParent:parent, withChild:child};
|
|
}
|
|
let branch = findParent(parents, parent);
|
|
if (branch.foundParent !== null) {
|
|
return branch;
|
|
}
|
|
}
|
|
}
|
|
return {foundParent:null, withChild:child};
|
|
};
|
|
|
|
iterateParents(parents, childA);
|
|
return findParent(parents, childB);
|
|
}
|
|
|
|
/**
|
|
* Abstract the getting of the position so we won't have to repeat the check for direction all the time
|
|
* @param node
|
|
* @param position
|
|
* @param level
|
|
* @private
|
|
*/
|
|
_setPositionForHierarchy(node, position, level, doNotUpdate = false) {
|
|
if (doNotUpdate !== true) {
|
|
if (this.distributionOrdering[level] === undefined) {
|
|
this.distributionOrdering[level] = [];
|
|
this.distributionOrderingPresence[level] = {};
|
|
}
|
|
|
|
if (this.distributionOrderingPresence[level][node.id] === undefined) {
|
|
this.distributionOrdering[level].push(node);
|
|
this.distributionIndex[node.id] = this.distributionOrdering[level].length - 1;
|
|
}
|
|
this.distributionOrderingPresence[level][node.id] = true;
|
|
|
|
if (this.hierarchicalTrees[node.id] === undefined) {
|
|
if (this.hierarchicalChildren[node.id] !== undefined) {
|
|
let tree = 1;
|
|
// get the lowest tree denominator.
|
|
for (let i = 0; i < this.hierarchicalChildren[node.id].parents.length; i++) {
|
|
let parentId = this.hierarchicalChildren[node.id].parents[i];
|
|
if (this.hierarchicalTrees[parentId] !== undefined) {
|
|
//tree = Math.min(tree,this.hierarchicalTrees[parentId]);
|
|
tree = this.hierarchicalTrees[parentId];
|
|
}
|
|
}
|
|
//for (let i = 0; i < this.hierarchicalChildren.parents.length; i++) {
|
|
// let parentId = this.hierarchicalChildren.parents[i];
|
|
// this.hierarchicalTrees[parentId] = tree;
|
|
//}
|
|
this.hierarchicalTrees[node.id] = tree;
|
|
}
|
|
else {
|
|
this.hierarchicalTrees[node.id] = ++this.treeIndex;
|
|
}
|
|
}
|
|
}
|
|
if (this.options.hierarchical.direction === 'UD' || this.options.hierarchical.direction === 'DU') {
|
|
node.x = position;
|
|
}
|
|
else {
|
|
node.y = position;
|
|
}
|
|
}
|
|
|
|
/**
|
|
* Abstract the getting of the position of a node so we do not have to repeat the direction check all the time.
|
|
* @param node
|
|
* @returns {number|*}
|
|
* @private
|
|
*/
|
|
_getPositionForHierarchy(node) {
|
|
if (this.options.hierarchical.direction === 'UD' || this.options.hierarchical.direction === 'DU') {
|
|
return node.x;
|
|
}
|
|
else {
|
|
return node.y;
|
|
}
|
|
}
|
|
|
|
/**
|
|
* Use the x or y value to sort the array, allowing users to specify order.
|
|
* @param nodeArray
|
|
* @private
|
|
*/
|
|
_sortNodeArray(nodeArray) {
|
|
if (nodeArray.length > 1) {
|
|
if (this.options.hierarchical.direction === 'UD' || this.options.hierarchical.direction === 'DU') {
|
|
nodeArray.sort(function (a, b) {
|
|
return a.x - b.x;
|
|
})
|
|
}
|
|
else {
|
|
nodeArray.sort(function (a, b) {
|
|
return a.y - b.y;
|
|
})
|
|
}
|
|
}
|
|
}
|
|
|
|
|
|
|
|
}
|
|
|
|
export default LayoutEngine;
|